Genome sc|0001607


Database

NCBI Assembly

Accession

GCA_037465725.1

Genomics

Accession
NCBI Assembly:GCA_037465725.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.07%
  • Contamination: 0.0%
  • Quality: 97.07
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 17 amino acids
Sequencing depth
97.1 ×
Source
Other features
  • G+C Content: 46.0%
  • Coding Density: 88.98%
  • Codon Table: 11
  • N50: 14,894 bp
  • Contigs: 233
  • Largest Contig: 48,066 bp
  • Assembly Length: 2,526,953 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 11 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2019-06-11 • 2012
Location
Lat Lon: 37.0902 N 95.7129 W
Toponym
Geo Loc Name: USA
Environment
Env Material: ENVO:00002003
Sample Type: metagenomic assembly
Env Biome: ENVO:00009003
Isolation Source: feces
Other
Host: Homo sapiens
Package
Ncbi Submission Package: MIMAG.6.0MIMS.me.human-gut.5.0
Biosamplemodel: MIMAG • MIGS/MIMS/MIMARKS.human-gut
Additional Accessions
SRR6028624
All retrieved samples

Metadata retrieved 11 days ago

Sequencing Experiments

WGS of metagenomic and metatranscriptomic sequencing of the human gut microbiome: Subject 10083403
WGS of metagenomic and metatranscriptomic sequencing of the human gut microbiome: Subject 10083403


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