JSON

Genome sc|0001657

Name

“Accumulibacter conexus”

Database

NCBI Assembly

Accession

GCA_017592775.1

Genomics

Accession
NCBI Assembly:GCA_017592775.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.97%
  • Contamination: 3.04%
  • Quality: 83.77
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 0 23S rRNAs
  • tRNAs for 18 amino acids
Sequencing depth
20.0 ×
Source
Other features
  • G+C Content: 66.27%
  • Coding Density: 89.44%
  • Codon Table: 11
  • N50: 78,258 bp
  • Contigs: 102
  • Largest Contig: 244,635 bp
  • Assembly Length: 4,870,756 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2016-10
Location
Lat Lon: 43.071 N 89.401 W
Toponym
Geo Loc Name: USA:WI
Environment
Sample Type: metagenomic assembly
Isolation Source: activated sludge
Env Broad Scale: wastewater
Env Local Scale: bioreactor
Env Medium: synthetic medium
Other
Not detected
Package
Ncbi Package: MIMAG.wastewater.6.0
Additional Accessions
SAMN16421763, SAMN16421762, SAMN16421761
All retrieved samples
Metadata retrieved 5 months ago


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