JSON

Genome sc|0001688

Name

Not registered

Database

NCBI Assembly

Accession

NZ_CP130558

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
NCBI Assembly:NZ_CP130558
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 4.86%
  • Quality: 75.7
Ribosomal and transfer RNA genes
  • 5 16S rRNAs (unknown length)
  • 5 23S rRNAs (unknown length)
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 33.82%
Submitter comments
The completeness and G+C content of the genome was estimated by using the gVolante online tool with program BUSCO (v5) and ortholog set Thermoanaerobacterales. The contamination and number of 16S and 23 rRNA genes were estimated by the NCBI Refseq.
Automated checks
Failed: Cannot find ncbi:assembly:NZ_CP130558
Edit genome data
Last modified 9 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2017-06-06
Location
Lat Lon: 17.238996 N 73.551293 E
Toponym
Geo Loc Name: India: Maharashtra
Environment
Isolation Source: Hot spring sediment
Env Broad Scale: no data
Env Local Scale: no data
Env Medium: no data
Other
Depth: no data
Isol Growth Condt: no data
Package
Ncbi Package: MIGS.ba.sediment.6.0
All retrieved samples
Metadata retrieved 9 months ago


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