JSON

Genome sc|0001733

Name

Not registered

Database

INSDC Nucleotide

Accession

JAPDQM000000000

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
INSDC Nucleotide:JAPDQM000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 87.85% (automated estimate: 84.0%)
  • Contamination: 2.2% (automated estimate: 1.9%)
  • Quality: 76.85 (automated estimate: 74.5)
Ribosomal and transfer RNA genes
  • 0 16S rRNAs (automated estimate: 0)
  • 0 23S rRNAs (automated estimate: 0)
  • tRNAs for 29 amino acids (automated estimate: 16)
Sequencing depth
17.0 ×
Source
Other features
  • G+C Content: 47.62% (automated estimate: 47.62%)
  • Coding Density: 86.19%
  • Codon Table: 11
  • N50: 30,140 bp
  • Contigs: 190
  • Largest Contig: 102,774 bp
  • Assembly Length: 4,157,021 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Edit genome data
Last modified 8 months ago


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