JSON

Genome sc|0000178

Name

“Anaerostipes excrementavium”

Database

NCBI Assembly

Accession

GCA_019114985.1

Genomics

Accession
NCBI Assembly:GCA_019114985.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.75%
  • Contamination: 2.01%
  • Quality: 85.7
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 17 amino acids
Source
Other features
  • G+C Content: 41.56%
  • Coding Density: 90.78%
  • Codon Table: 11
  • N50: 103,720 bp
  • Contigs: 40
  • Largest Contig: 250,459 bp
  • Assembly Length: 2,691,428 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Sample Type: metagenomic assembly
Other
Host: Gallus gallus
Package
Ena Checklist: ERC000011
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
Additional Accessions
ERR3414586
All retrieved samples
Metadata retrieved 8 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license