JSON

Genome sc|0001911

Name

Eutrophocola salsuginisTs

Database

NCBI Assembly

Accession

GCA_038147195.1

Genomics

Accession
NCBI Assembly:GCA_038147195.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.58%
  • Contamination: 1.79%
  • Quality: 84.63
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 54.5%
  • Coding Density: 89.06%
  • Codon Table: 11
  • N50: 2,601,762 bp
  • Contigs: 6
  • Largest Contig: 2,601,762 bp
  • Assembly Length: 2,982,448 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination were evaluated using CheckM v 1.1.3
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2020-02-26
Location
Lat Lon: 27.445556 S 153.084444 E
Toponym
Geo Loc Name: Australia:Brisbane
Environment
Sample Type: metagenomic assembly
Isolation Source: estuary
Env Broad Scale: estuarine biome
Env Local Scale: estuary • brackish
Env Medium: estuarine water
Other
Depth: 0
Package
Ncbi Submission Package: MIMAG.water.6.0 • MIMS.me.water.6.0
Biosamplemodel: MIMAG.water • MIGS/MIMS/MIMARKS.water
All retrieved samples
Metadata retrieved 5 months ago


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