The Prokaryotic Genome Annotation Pipeline (PGAP) was used to identify tRNA and rRNA genes. Completion and contamination were estimated by CheckM. Although analysis with CheckM suggested low completeness, this was likely due to the reduced genome size typical of Nanoarchaeota. The program identified 120-121 archaeal marker genes, which is very similar to the number of marker genes (118-119) identified in the complete genomes of two other Nanoarchaeota, Cand. Nanopusillus acidilobi and Nanoarchaeum equitans (see St. John et al., 2019). For this reason, completion is estimated at 100%.
Automated checks
Complete
Sample Metadata
Date
Collection Date:
2015-04
Location
Lat Lon:
38.0654 S 176.3595 E
Toponym
Geo Loc Name:
New Zealand: Tikitere, geothermal spring
Environment
Env Material:
water and sediment
Sample Type:
metagenomic assembly
Env Biome:
geothermal spring
Isolation Source:
5 single cells from different organisms amplified by MDA; water and sediment from hot spring
This genome was automatically retrieved and processed using MiGA
(The Microbial Genomes Atlas) [1], and the estimate has not been
overridden by the submitter.