SeqCode Registry
cognitis nomina
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Genomes
sc|0001939
JSON
Genome sc|0001939
Database
INSDC Nucleotide
Accession
JBDRUU000000000
Genomics
Accession
INSDC Nucleotide:
JBDRUU000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
92.86%
(automated estimate: 87.7%)
Contamination:
1.1%
(automated estimate: 0.9%)
Quality:
87.36
(automated estimate: 83.2)
Ribosomal and transfer RNA genes
0 16S rRNAs
0 23S rRNAs
tRNAs for 20 amino acids
Sequencing depth
10.805 ×
Source
BioSample: SAMN40924741
Other features
G+C Content:
39.4%
(automated estimate: 39.4%)
Coding Density:
94.23%
Codon Table:
11
N50:
70,091 bp
Contigs:
32
Largest Contig:
242,064 bp
Assembly Length:
1,347,773 bp
Ambiguous Assembly Fraction:
0.00074%
Automated checks
Complete
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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