JSON

Genome sc|0000195

Name

“Mediterraneibacter faecipullorum”

Database

NCBI Assembly

Accession

GCA_019119675.1

Genomics

Accession
NCBI Assembly:GCA_019119675.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.1%
  • Contamination: 1.46%
  • Quality: 87.8
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 11 amino acids
Source
Other features
  • G+C Content: 47.37%
  • Coding Density: 89.77%
  • Codon Table: 11
  • N50: 25,525 bp
  • Contigs: 153
  • Largest Contig: 71,321 bp
  • Assembly Length: 2,763,228 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015-07-21
Location
Not detected
Toponym
Geo Loc Name: China:Wuhan
Environment
Sample Type: metagenomic assembly
Isolation Source: cecum
Other
Host: Gallus gallus • chicken
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
Additional Accessions
SRR5533438
All retrieved samples
Metadata retrieved 8 months ago


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