JSON

Genome sc|0000197

Name

“Alistipes stercoravium”

Database

NCBI Assembly

Accession

GCA_019119615.1

Genomics

Accession
NCBI Assembly:GCA_019119615.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.08%
  • Contamination: 1.06%
  • Quality: 91.78
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 18 amino acids
Source
Other features
  • G+C Content: 61.34%
  • Coding Density: 91.87%
  • Codon Table: 11
  • N50: 46,307 bp
  • Contigs: 64
  • Largest Contig: 97,012 bp
  • Assembly Length: 2,117,308 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015-05-19
Location
Not detected
Toponym
Geo Loc Name: China:Hunan
Environment
Sample Type: metagenomic assembly
Isolation Source: jejunum
Other
Host: Gallus gallus
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
Additional Accessions
SRR6323450
All retrieved samples
Metadata retrieved 10 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license