JSON

Genome sc|0000198

Name

“Eisenbergiella merdavium”

Database

NCBI Assembly

Accession

GCA_019119595.1

Genomics

Accession
NCBI Assembly:GCA_019119595.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.4%
  • Contamination: 4.36%
  • Quality: 73.6
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 53.35%
  • Coding Density: 88.6%
  • Codon Table: 11
  • N50: 93,648 bp
  • Contigs: 75
  • Largest Contig: 259,894 bp
  • Assembly Length: 4,539,963 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015-07-13
Location
Lat Lon: 38.98 N 76.94 W
Toponym
Geo Loc Name: USA
Environment
Sample Type: metagenomic assembly
Isolation Source: groupA replicate 2
Other
Host: Gallus gallus • Chicken
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
Additional Accessions
SRR5280393
All retrieved samples
Metadata retrieved 10 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license