JSON

Genome sc|0002008

Name

Not registered

Database

NCBI Assembly

Accession

JAFGON01

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
NCBI Assembly:JAFGON01
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 90.29%
  • Contamination: 0.0%
  • Quality: 90.29
Sequencing depth
12.8 ×
Source
Other features
  • G+C Content: 42.35%
Automated checks
Failed: Cannot find ncbi:assembly:JAFGON01
Edit genome data
Last modified 7 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2017-09
Location
Lat Lon: 34.99562 N 98.68895 W
Toponym
Geo Loc Name: USA: Anadarko, OK, Zodletone Spring
Environment
Sample Type: metagenomic assembly
Isolation Source: freshwater sediment
Env Broad Scale: Freshwater sediment biome
Env Local Scale: sediment
Env Medium: sediment
Other
Depth: 1m
Package
Ncbi Package: MIMAG.sediment.6.0
Additional Accessions
SAMN17269717 Append as BioSamples
All retrieved samples
Metadata retrieved 7 months ago


© 2022-2025 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license