Genome sc|0002011

Genomics

Accession

NCBI Assembly:LKUE01

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 95.24%
• Contamination: 2.2%
• Quality: 84.24

Sequencing depth

214.0 ×

Source

• BioSample: SAMN04125646

Other features

• G+C Content: 37.86%

Automated checks

Failed: Cannot find ncbi:assembly:LKUE01

Sample Metadata

Date

Collection Date: 2013-11-10

Location

Lat Lon: 32.70 N 117.16 W

Toponym

Geo Loc Name: USA: San Diego Bay Sediment

Environment

Sample Type: metagenomic assembly

Isolation Source: methanogenic consortium capable of long-chain paraffin degradation (SDB culture) enriched from contaminated sediments of San Diego Bay, California; degrades n-alkanes from C25 to C50

Other

Not detected

Package

Ncbi Submission Package: Microbe.1.0

Biosamplemodel: Microbe, viral or environmental

All retrieved samples

• SAMN04125646: SDB Consortium Genome Bin 3

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Metadata retrieved 4 months ago