SeqCode Registry
cognitis nomina
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Genomes
sc|0000212
JSON
Genome sc|0000212
Database
NCBI Assembly
Accession
GCA_019118505.1
Genomics
Accession
NCBI Assembly:
GCA_019118505.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
96.89%
(automated estimate: 97.2%)
Contamination:
4.54%
(automated estimate: 11.3%)
Quality:
74.19
(automated estimate: 40.7)
Ribosomal and transfer RNA genes
1 16S rRNA (up to 49.0%)
0 23S rRNAs
tRNAs for 13 amino acids
Source
BioSample: SAMN15816661
Other features
G+C Content:
63.73%
(automated estimate: 63.73%)
Coding Density:
88.09%
Codon Table:
11
N50:
21,827 bp
Contigs:
184
Largest Contig:
76,612 bp
Assembly Length:
2,527,886 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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