SeqCode Registry
cognitis nomina
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Genomes
sc|0000216
JSON
Genome sc|0000216
Database
NCBI Assembly
Accession
GCA_019118245.1
Genomics
Accession
NCBI Assembly:
GCA_019118245.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
97.27%
(automated estimate: 97.2%)
Contamination:
3.41%
(automated estimate: 4.7%)
Quality:
80.22
(automated estimate: 73.7)
Ribosomal and transfer RNA genes
0 16S rRNAs
0 23S rRNAs
tRNAs for 15 amino acids
Source
BioSample: SAMN15816667
Other features
G+C Content:
64.01%
(automated estimate: 64.01%)
Coding Density:
87.41%
Codon Table:
11
N50:
35,648 bp
Contigs:
108
Largest Contig:
86,913 bp
Assembly Length:
2,408,516 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
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All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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