JSON

Genome sc|0000225

Name

“Collinsella stercoripullorum”

Database

NCBI Assembly

Accession

GCA_019117005.1

Genomics

Accession
NCBI Assembly:GCA_019117005.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.07%
  • Contamination: 0.27%
  • Quality: 96.72
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 68.78%
  • Coding Density: 85.14%
  • Codon Table: 11
  • N50: 62,049 bp
  • Contigs: 59
  • Largest Contig: 193,131 bp
  • Assembly Length: 2,221,652 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015-07-02
Location
Not detected
Toponym
Geo Loc Name: China:Guandong
Environment
Sample Type: metagenomic assembly
Isolation Source: jejunum
Other
Host: Gallus gallus
Package
Ncbi Submission Package: Microbe.1.0 • Metagenome.environmental.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
Additional Accessions
SRR6323492
All retrieved samples
Metadata retrieved 10 months ago


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