JSON

Genome sc|0002280

Name

“Limosimicrobium quartum”

Database

NCBI Assembly

Accession

GCA_005223075.1

Genomics

Accession
NCBI Assembly:GCA_005223075.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.8%
  • Contamination: 0.0%
  • Quality: 97.8
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
28.0 ×
Source
Other features
  • G+C Content: 52.55%
  • Coding Density: 88.1%
  • Codon Table: 11
  • N50: 104,346 bp
  • Contigs: 42
  • Largest Contig: 313,553 bp
  • Assembly Length: 2,414,740 bp
  • Ambiguous Assembly Fraction: 0.00083%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015-07-01
Location
Lat Lon: 22.17 N 118.4 E
Toponym
Geo Loc Name: China: the north of the South China Sea
Environment
Sample Type: metagenomic assembly
Isolation Source: marine sediment
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 4 months ago


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