SeqCode Registry
cognitis nomina
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Genomes
sc|0002286
JSON
Genome sc|0002286
Database
NCBI Assembly
Accession
GCA_001303785.1
Genomics
Accession
NCBI Assembly:
GCA_001303785.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
93.41%
(automated estimate: 95.3%)
Contamination:
1.1%
(automated estimate: 0.9%)
Quality:
87.91
(automated estimate: 90.8)
Ribosomal and transfer RNA genes
0 16S rRNAs
0 23S rRNAs
tRNAs for 21 amino acids
Sequencing depth
120.0 ×
Source
BioSample: SAMN03994203
Other features
G+C Content:
46.25%
Coding Density:
91.2%
Codon Table:
11
N50:
75,562 bp
Contigs:
59
Largest Contig:
339,863 bp
Assembly Length:
2,532,789 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
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All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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