SeqCode Registry
cognitis nomina
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Genomes
sc|0002291
JSON
Genome sc|0002291
Database
NCBI Assembly
Accession
GCA_903884565.1
Genomics
Accession
NCBI Assembly:
GCA_903884565.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
93.38%
(automated estimate: 91.5%)
Contamination:
1.12%
(automated estimate: 2.8%)
Quality:
87.78
(automated estimate: 77.5)
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 68.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 21 amino acids
Sequencing depth
10.0 ×
Source
BioSample: SAMEA6956938
Other features
G+C Content:
38.66%
Coding Density:
90.41%
Codon Table:
11
N50:
100,901 bp
Contigs:
57
Largest Contig:
155,161 bp
Assembly Length:
2,261,013 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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