SeqCode Registry
cognitis nomina
About
Search
•
Login
Register
Genomes
sc|0002294
JSON
Genome sc|0002294
Database
NCBI Assembly
Accession
GCA_003641665.1
Genomics
Accession
NCBI Assembly:
GCA_003641665.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
94.06%
(automated estimate: 91.5%)
Contamination:
0.0%
(automated estimate: 0.9%)
Quality:
94.06
(automated estimate: 87.0)
Ribosomal and transfer RNA genes
1 16S rRNA (up to 59.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 17 amino acids
Sequencing depth
15.2 ×
Source
BioSample: SAMN09215298
Other features
G+C Content:
36.33%
Coding Density:
93.98%
Codon Table:
11
N50:
12,789 bp
Contigs:
184
Largest Contig:
43,792 bp
Assembly Length:
1,752,032 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
Search
×
Names
Publications
Authors
Subjects