JSON

Genome sc|0002316

Name

Not registered

Database

NCBI Assembly

Accession

SAMN40176692

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
NCBI Assembly:SAMN40176692
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.2%
  • Contamination: 1.87%
  • Quality: 87.85
Sequencing depth
45.0 ×
Source
Other features
  • G+C Content: 49.6%
Automated checks
Failed: Cannot find ncbi:assembly:SAMN40176692
Edit genome data
Last modified 7 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2019-10-26
Location
Lat Lon: 38.41 N 122.31 W
Toponym
Geo Loc Name: USA: California, Lake County
Environment
Sample Type: metagenomic assembly
Isolation Source: sediment of a seasonal wetland
Env Broad Scale: temperate woodland biome [ENVO:01000221]
Env Local Scale: lake bottom mud [ENVO:00005797]
Env Medium: lake bottom mud [ENVO:00005797]
Other
Depth: 100cm
Package
Ncbi Submission Package: MIMAG.soil.6.0
Biosamplemodel: MIMAG.soil
Additional Accessions
SAMN21157288
All retrieved samples
Metadata retrieved 7 months ago


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