JSON

Genome sc|0002324

Name

Not registered

Database

NCBI Assembly

Accession

GCA_003486325.1

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
NCBI Assembly:GCA_003486325.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 89.91% (automated estimate: 84.9%)
  • Contamination: 4.24% (automated estimate: 2.8%)
  • Quality: 68.71 (automated estimate: 70.9)
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 18 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 38.87% (automated estimate: 38.79%)
  • Coding Density: 86.66%
  • Codon Table: 11
  • N50: 9,556 bp
  • Contigs: 304
  • Largest Contig: 31,584 bp
  • Assembly Length: 2,349,751 bp
  • Ambiguous Assembly Fraction: 0.2%
Automated checks
Complete
Edit genome data
Last modified 6 months ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Sample Type: metagenomic assembly
Isolation Source: hydrocarbon
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 6 months ago


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