JSON

Genome sc|0002331

Name

“Hadalibacter litoralis”

Database

NCBI Assembly

Accession

GCA_964199975.1

Genomics

Accession
NCBI Assembly:GCA_964199975.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 87.3%
  • Contamination: 4.9%
  • Quality: 62.8
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 54.0%)
  • 2 23S rRNAs (up to 90.0%)
  • tRNAs for 13 amino acids
Sequencing depth
4.0 ×
Source
Other features
  • G+C Content: 59.0%
  • Coding Density: 91.6%
  • Codon Table: 11
  • N50: 4,231 bp
  • Contigs: 599
  • Largest Contig: 24,901 bp
  • Assembly Length: 2,256,330 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2017-12-20
Location
Geographic Location Latitude: 78.11
Geographic Location Longitude: 14.35
Toponym
Geographic Location Country And Or Sea: Svalbard
Environment
Environment Biome: marine biome [ENVO:00000447]
Environment Feature: microbial feature [ENVO:01000007]
Other
Geographic Location Depth: -0.02
Package
Ena Checklist: ERC000021
All retrieved samples
Metadata retrieved about 2 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license