JSON

Genome sc|0002332

Name

“Ilumatobacter isfjordensis”

Database

NCBI Assembly

Accession

GCA_964199985.1

Genomics

Accession
NCBI Assembly:GCA_964199985.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.5%
  • Contamination: 8.1%
  • Quality: 52.0
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Sequencing depth
6.0 ×
Source
Other features
  • G+C Content: 64.0%
  • Coding Density: 91.5%
  • Codon Table: 11
  • N50: 6,911 bp
  • Contigs: 876
  • Largest Contig: 31,251 bp
  • Assembly Length: 4,821,387 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2018-02-28
Location
Geographic Location Latitude: 78.11
Geographic Location Longitude: 14.35
Toponym
Geographic Location Country And Or Sea: Svalbard
Environment
Environment Biome: marine biome [ENVO:00000447]
Environment Feature: microbial feature [ENVO:01000007]
Other
Geographic Location Depth: -0.02
Package
Ena Checklist: ERC000021
All retrieved samples
Metadata retrieved 3 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license