JSON

Genome sc|0002341

Name

Not registered

Database

NCBI Assembly

Accession

SAMN15005494

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
NCBI Assembly:SAMN15005494
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.6%
  • Contamination: 1.82%
  • Quality: 90.5
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
50.0 ×
Source
Other features
  • G+C Content: 47.53%
Submitter comments
The genome assembly of Magnetominusculus dajiuhuensis is of high quality, as indicated by the completeness score of 99.09% and the low contamination rate of 1.82%. The presence of all key ribosomal RNA genes (1 copy each of 16S, 23S, and 5S rRNA genes), 19 tRNA genes and a substantial number of coding sequences (3,368 CDS) indicates a functionally complete genome. The N50 value of 23,014 bp and the significant length of the largest contig (101,549 bp) also suggest that many parts of the genome are well-assembled and thus it can prove to be a valuable resource for further studies on this organism.

Automated checks
Failed: Cannot find ncbi:assembly:SAMN15005494
Edit genome data
Last modified 6 months ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
Metadata retrieved 6 months ago


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