Genome sc|0000246


Database

NCBI Assembly

Accession

GCA_019115485.1

Genomics

Accession
NCBI Assembly:GCA_019115485.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.59%
  • Contamination: 0.38%
  • Quality: 96.69
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 52.73%
  • Coding Density: 90.39%
  • Codon Table: 11
  • N50: 66,500 bp
  • Contigs: 60
  • Largest Contig: 219,401 bp
  • Assembly Length: 2,684,356 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015
Location
Geographic Location Latitude: 42.7339 N
Geographic Location Longitude: 25.4858 E
Toponym
Geographic Location Country And Or Sea: Italy
Environment
Sample Type: metagenomic assembly
Environment Biome: poultry
Environment Feature: gut
Other
Host: Gallus gallus
Package
Ena Checklist: ERC000013
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
Additional Accessions
ERR2241862
All retrieved samples

Metadata retrieved 10 months ago


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