JSON

Genome sc|0000025

Name

Not registered

Database

NCBI Assembly

Accession

GCA_000718005.1

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
NCBI Assembly:GCA_000718005.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.1%
  • Contamination: 7.5%
  • Quality: 60.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
308.0 ×
Source
Other features
  • G+C Content: 72.5%
  • Coding Density: 84.14%
  • Codon Table: 11
  • N50: 320,749 bp
  • Contigs: 153
  • Largest Contig: 802,983 bp
  • Assembly Length: 6,026,369 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Edit genome data
Last modified 12 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2010
Location
Not detected
Toponym
Not detected
Environment
Isolation Source: rice straw
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 12 months ago


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