JSON

Genome sc|0000255

Name

“Desulfovibrio intestinigallinarum”

Database

NCBI Assembly

Accession

GCA_019114565.1

Genomics

Accession
NCBI Assembly:GCA_019114565.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.44%
  • Contamination: 3.92%
  • Quality: 74.84
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 61.03%
  • Coding Density: 83.2%
  • Codon Table: 11
  • N50: 12,087 bp
  • Contigs: 297
  • Largest Contig: 49,278 bp
  • Assembly Length: 2,898,679 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015-09-03
Location
Not detected
Toponym
Geo Loc Name: China:Henan
Environment
Sample Type: metagenomic assembly
Isolation Source: cecum
Other
Host: Gallus gallus
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
Additional Accessions
SRR6323528
All retrieved samples
Metadata retrieved 8 months ago


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