Genome sc|0002608

Genomics

Accession

NCBI Assembly:GCA_038040485.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 98.01%
• Contamination: 3.42%
• Quality: 80.91

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 1 23S rRNA (up to 29.0%)
• tRNAs for 21 amino acids

Sequencing depth

2.5 ×

Other features

• G+C Content: 57.5%
• Coding Density: 87.25%
• Codon Table: 11
• N50: 162,452 bp
• Contigs: 72
• Largest Contig: 450,606 bp
• Assembly Length: 6,906,781 bp
• Ambiguous Assembly Fraction: 0.044%

Submitter comments

PLATFORM: The sequencing platform was Illumina NovaSeq 6000 S4 (2 x 150 bp).

PROGRAM: The metagenome was assembled with metaSPAdes v3.11.1 and binned using MaxBin2 v2.2.5 and MetaBAT2 v2.12.1. Annotated with Prokka v1.14.5. Functional description was done with DRAM.

Automated checks

Complete