Genome sc|0000267

Name

Caribbeanibacter nitroreducens^Ts

Database

NCBI Assembly

Accession

GCA_947581645.1

Genomics

Accession

NCBI Assembly:GCA_947581645.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

Completeness: 96.15%
Contamination: 4.4%
Quality: 74.15

Ribosomal and transfer RNA genes

0 16S rRNAs
0 23S rRNAs
tRNAs for 20 amino acids

Source

SRA: SRR6201607

Other features

G+C Content: 71.68%
Coding Density: 91.09%
Codon Table: 11
N50: 23,271 bp
Contigs: 199
Largest Contig: 95,544 bp
Assembly Length: 2,956,959 bp
Ambiguous Assembly Fraction: 0.0%

Submitter comments

Genome quality has been evaluated using checkM, 16S rRNA gene presence has been analysed with sortmerna and tRNAscan was used to identify tRNA

Automated checks

Complete

Last modified over 1 year ago

Sample Metadata

BioSample entries

BioSample: SRS2617734

Date

Collection Date: 2011-12-14

Location

Lat Lon: 17° 57′ 3.9″ N, 67° 11′ 35″ W

View map of sampling locations

Toponym

Geo Loc Name: Puerto Rico:Cabo Rojo, Puerto Rico

Environment

Isolation Source: Cabo Rojo, Puerto Rico

Gold Ecosystem Classification: Environmental | Aquatic | Marine | Coastal | Sediment

Other

Not detected

Package

Ncbi Submission Package: Metagenome.environmental.1.0

Biosamplemodel: Metagenome or environmental

All retrieved samples

SRS2617734: Marine sediment microbial community from Cabo Rojo, Puerto Rico - PR CR 10% Liquid 1

Metadata retrieved over 1 year ago

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