JSON

Genome sc|0003100

Name

Azoamicus ciliaticolaTs

Database

NCBI Assembly

Accession

GCF_902860225.1

Genomics

Accession
NCBI Assembly:GCF_902860225.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
57.0 ×
Source
Other features
  • G+C Content: 24.5%
  • Coding Density: 94.08%
  • Codon Table: 11
  • N50: 292,520 bp
  • Contigs: 1
  • Largest Contig: 292,520 bp
  • Assembly Length: 292,520 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Circular endosymbiont genome. Completeness and contamination based on the circularity, not marker gene content
Automated checks
Complete
Last modified over 1 year ago

Sample Metadata

BioSample entries
Date
Collection Date: 2018-10-17
Location
Geographic Location Latitude: 47° 6′ 2.9″ N
Geographic Location Longitude: 8° 29′ 33″ E
View map of sampling locations
Toponym
Geographic Location Country And Or Sea: Switzerland
Environment
Isolation Source: Water from
Environment Biome: freshwater lake biome • freshwater lake biome [ENVO:01000252]
Environment Feature: lake • microbial feature [ENVO:01000007]
Other
Geographic Location Depth: 180
Package
Ena Checklist: ERC000047 • ERC000024
All retrieved samples
Metadata retrieved over 1 year ago


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