SeqCode Registry
cognitis nomina
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Genomes
sc|0003135
JSON
Genome sc|0003135
Database
NCBI Assembly
Accession
GCA_034179985.1
Genomics
Accession
NCBI Assembly:
GCA_034179985.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
95.51%
(automated estimate: 95.3%)
Contamination:
0.0%
(automated estimate: 0.0%)
Quality:
95.51
(automated estimate: 95.3)
Ribosomal and transfer RNA genes
1 16S rRNA (up to 0.0%)
(automated estimate: 0)
1 23S rRNA (up to 0.0%)
(automated estimate: 1)
tRNAs for 18 amino acids
Sequencing depth
40.4 ×
Source
BioSample: SAMN37949671
Other features
G+C Content:
51.08%
(automated estimate: 51.08%)
Coding Density:
89.39%
Codon Table:
11
N50:
41,309 bp
Contigs:
55
Largest Contig:
100,723 bp
Assembly Length:
1,511,432 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
12 days ago
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All information contributed to the SeqCode Registry is released under the terms of the
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license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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