Keywords: GSC:MIxS;MIGS:5.0

BioSample Accession(s)

SAMN19490053, SRS10984635

strain

L6-1

altitude

26000 m

collection_date

2013-08-21

isol_growth_condt

PMID: 31316133

ref_biomaterial

PMID: 31316133

INSDC secondary accession

SRS10984635

organism

Curtobacterium sp. L6-1

env_broad_scale

ENVO:01000267

env_local_scale

ENVO:01000538

NCBI submission package

MIGS.ba.air.5.0

num_replicons

1

geo_loc_name

USA: New Mexico

env_medium

ENVO:01001711

lat_lon

34.4731 N 104.242 W

BioSampleModel

MIGS.ba

ENA-FIRST-PUBLIC

2021-06-03

ENA-LAST-UPDATE

2021-11-08

Metadata as EBI XML

<EXPERIMENT_SET>
<EXPERIMENT accession="SRX13047321" alias="L6-1" center_name="SUB10628888" broker_name="NCBI">
  <IDENTIFIERS>
    <PRIMARY_ID>SRX13047321</PRIMARY_ID>
    <SUBMITTER_ID namespace="SUB10628888">L6-1</SUBMITTER_ID>
  </IDENTIFIERS>
  <TITLE>Raw PacBio reads of Curtobacterium sp. L6-1</TITLE>
  <STUDY_REF accession="SRP345042">
    <IDENTIFIERS>
      <PRIMARY_ID>SRP345042</PRIMARY_ID>
      <EXTERNAL_ID namespace="BioProject">PRJNA734343</EXTERNAL_ID>
    </IDENTIFIERS>
  </STUDY_REF>
  <DESIGN>
    <DESIGN_DESCRIPTION>Library constructed using PacBio Express Template Prep Kit 2.0</DESIGN_DESCRIPTION>
    <SAMPLE_DESCRIPTOR accession="SRS10984635">
      <IDENTIFIERS>
        <PRIMARY_ID>SRS10984635</PRIMARY_ID>
        <EXTERNAL_ID namespace="BioSample">SAMN19490053</EXTERNAL_ID>
      </IDENTIFIERS>
    </SAMPLE_DESCRIPTOR>
    <LIBRARY_DESCRIPTOR>
      <LIBRARY_NAME>L6-1</LIBRARY_NAME>
      <LIBRARY_STRATEGY>WGS</LIBRARY_STRATEGY>
      <LIBRARY_SOURCE>GENOMIC</LIBRARY_SOURCE>
      <LIBRARY_SELECTION>RANDOM</LIBRARY_SELECTION>
      <LIBRARY_LAYOUT>
        <SINGLE/>
      </LIBRARY_LAYOUT>
    </LIBRARY_DESCRIPTOR>
  </DESIGN>
  <PLATFORM>
    <PACBIO_SMRT>
      <INSTRUMENT_MODEL>Sequel II</INSTRUMENT_MODEL>
    </PACBIO_SMRT>
  </PLATFORM>
  <EXPERIMENT_LINKS>
    <EXPERIMENT_LINK>
      <XREF_LINK>
        <DB>ENA-SAMPLE</DB>
        <ID>SRS10984635</ID>
      </XREF_LINK>
    </EXPERIMENT_LINK>
    <EXPERIMENT_LINK>
      <XREF_LINK>
        <DB>ENA-SUBMISSION</DB>
        <ID>SRA1325653</ID>
      </XREF_LINK>
    </EXPERIMENT_LINK>
    <EXPERIMENT_LINK>
      <XREF_LINK>
        <DB>ENA-FASTQ-FILES</DB>
        <ID><![CDATA[https://www.ebi.ac.uk/ena/portal/api/filereport?accession=SRX13047321&result=read_run&fields=run_accession,fastq_ftp,fastq_md5,fastq_bytes]]></ID>
      </XREF_LINK>
    </EXPERIMENT_LINK>
    <EXPERIMENT_LINK>
      <XREF_LINK>
        <DB>ENA-SUBMITTED-FILES</DB>
        <ID><![CDATA[https://www.ebi.ac.uk/ena/portal/api/filereport?accession=SRX13047321&result=read_run&fields=run_accession,submitted_ftp,submitted_md5,submitted_bytes,submitted_format]]></ID>
      </XREF_LINK>
    </EXPERIMENT_LINK>
  </EXPERIMENT_LINKS>
</EXPERIMENT>
</EXPERIMENT_SET>