Genome sc|0000032

Genomics

Accession

NCBI Assembly:GCA_902386535.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 96.2%
• Contamination: 15.4%
• Quality: 19.2

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 67.0%)
• 0 23S rRNAs
• tRNAs for 16 amino acids

Sequencing depth

9.1 ×

Source

• SRA: ERR1527273
• And 47 more…

Other features

• G+C Content: 57.63%
• Coding Density: 91.69%
• Codon Table: 11
• N50: 27,135 bp
• Contigs: 68
• Largest Contig: 64,824 bp
• Assembly Length: 1,196,731 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

Completeness/Redundancy estimates from 3 different methods (DPANN93, Anvi'o and CheckM v1) give completeness estimates of 90.12-96.77% and redundancy (contamination) values of 2.34-5.38%.

Automated checks

Complete

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Last modified 3 months ago

Sample Metadata

BioSample entries

• BioSample: SAMEA4835448

Date

Collection Date: 2015-04-23/2015-06-09

Location

Geographic Location Latitude: 34° 2′ 11″ S

Geographic Location Longitude: 150° 58′ 38″ E

View sampling location map

Toponym

Geographic Location Country And Or Sea: Australia

Environment

Environment Biome: groundwater

Environment Feature: groundwater

Other

Geographic Location Depth: 1

Package

Ena Checklist: ERC000024

All retrieved samples

• SAMEA4835448: Candidatus Burarchaeum australiense LFW-281_7

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Metadata retrieved 3 months ago