SeqCode Registry
cognitis nomina
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Genomes
sc|0003223
JSON
Genome sc|0003223
Name
“Kluyvera tianfuensis”
Database
NCBI Assembly
Accession
GCA_046569695.1
Genomics
Accession
NCBI Assembly:
GCA_046569695.1
Cultures
Strain sc|0038820
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
98.1%
Contamination:
0.9%
Quality:
93.6
Ribosomal and transfer RNA genes
3 16S rRNAs (up to 30.0%)
2 23S rRNAs (up to 29.0%)
tRNAs for 21 amino acids
Sequencing depth
633.0 ×
Source
BioSample: SAMN45956424
Other features
G+C Content:
54.82%
Coding Density:
88.02%
Codon Table:
11
N50:
207,401 bp
Contigs:
59
Largest Contig:
463,932 bp
Assembly Length:
4,827,774 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
about 7 hours ago
Sample Metadata
BioSample entries
BioSample: SAMN45956424
Date
Collection Date:
2024-10-24
Location
Not detected
Toponym
Geo Loc Name:
China: Chengdu, Sichuan
Environment
Sample Type:
pure culture
Isolation Source:
ascites
Other
Host:
Homo sapiens
Package
Ncbi Submission Package:
Microbe.1.0
Biosamplemodel:
Microbe, viral or environmental
All retrieved samples
SAMN45956424
: Microbe sample from Kluyvera sp. 142486
Metadata retrieved
about 7 hours ago
© 2022-2025 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN45956424
×
Metadata retrieved using the EBI API
BioSample Accession(s)
SAMN45956424, SRS23628827
strain
142486
collection_date
2024-10-24
INSDC secondary accession
SRS23628827
NCBI submission package
Microbe.1.0
organism
Kluyvera sp. 142486
host
Homo sapiens
geo_loc_name
China: Chengdu, Sichuan
sample_type
pure culture
isolation_source
ascites
BioSampleModel
Microbe, viral or environmental
ENA-FIRST-PUBLIC
2025-01-03
ENA-LAST-UPDATE
2025-01-03
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