Genome sc|0003253


Database

NCBI Assembly

Accession

GCA_051379705.1

Genomics

Accession
NCBI Assembly:GCA_051379705.1
Cultures
Strain sc|0039740
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 95.3%
  • Contamination: 0.9%
  • Quality: 90.8
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
1400.0 ×
Source
Other features
  • G+C Content: 40.38%
  • Coding Density: 93.29%
  • Codon Table: 11
  • N50: 3,967,350 bp
  • Contigs: 1
  • Largest Contig: 3,967,350 bp
  • Assembly Length: 3,967,350 bp
  • Ambiguous Assembly Fraction: 0.0001%
Automated checks
Complete

Last modified 8 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2023-01-30
Location
Lat Lon: 16° N, 140° W
View map of sampling locations
Toponym
Geo Loc Name: Pacific Ocean
Environment
Env Broad Scale: seawater: open ocean
Env Local Scale: seawater
Env Medium: seawater
Other
Depth: 15 m
Package
Ncbi Package: MIGS.ba.water.6.0
All retrieved samples

Metadata retrieved 8 months ago

Sequencing Experiments

Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome
Ekhidna algicida strain To15 genome


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