Genome sc|0000034


Database

NCBI Assembly

Accession

GCA_902386555.1

Genomics

Accession
NCBI Assembly:GCA_902386555.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.3%
  • Contamination: 3.8%
  • Quality: 73.3
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 78.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
27.3 ×
Source
Other features
  • G+C Content: 40.05%
  • Coding Density: 93.37%
  • Codon Table: 11
  • N50: 225,513 bp
  • Contigs: 11
  • Largest Contig: 577,647 bp
  • Assembly Length: 1,273,724 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 3 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2015 • 9/6/2015 • 27/4/2015 • 23-Apr-2015
Location
Not detected
Toponym
Geographic Location Country And Or Sea: Australia
Environment
Environment Biome: Groundwater
Other
Not detected
Package
Ena Checklist: ERC000011
All retrieved samples

Metadata retrieved 3 months ago

Sequencing Experiments

ERR1527285
ERR1527273
ERR1527286
ERR1527284
ERR1527283
ERR1527282
ERR1527281
ERR1527280
ERR1527279
ERR1527278
ERR1527277
ERR1527276
ERR1527275
ERR1527274
ERR1527258
ERR1527259
ERR1527260
ERR1527261
ERR1527262
ERR1527263
ERR1527264
ERR1527265
ERR1527266
ERR1527267
ERR1527268
ERR1527269
ERR1527270
ERR1527271
ERR1527272
ERR1527239
ERR1527240
ERR1527241
ERR1527242
ERR1527243
ERR1527244
ERR1527245
ERR1527246
ERR1527247
ERR1527248
ERR1527249
ERR1527250
ERR1527251
ERR1527252
ERR1527253
ERR1527254
ERR1527255
ERR1527256
ERR1527257


© 2022-2025 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license