SeqCode Registry
cognitis nomina
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Genomes
sc|0003515
JSON
Genome sc|0003515
Name
Rhizobium album
Database
NCBI Assembly
Accession
GCF_003122325.1
Genomics
Accession
NCBI Assembly:
GCF_003122325.1
Cultures
Strain sc|0038880
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
98.1%
Contamination:
1.9%
Quality:
88.6
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
12.0 ×
Source
BioSample: SAMN09039335
Other features
G+C Content:
61.9%
Coding Density:
88.47%
Codon Table:
11
N50:
302,817 bp
Contigs:
62
Largest Contig:
844,025 bp
Assembly Length:
6,868,712 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
20 days ago
Sample Metadata
BioSample entries
BioSample: SAMN09039335
Date
Collection Date:
2017-10-30
Location
Not detected
Toponym
Geo Loc Name:
China
Environment
Sample Type:
soil
Isolation Source:
soil
Other
Not detected
Package
Ncbi Submission Package:
Microbe.1.0
Biosamplemodel:
Microbe, viral or environmental
All retrieved samples
SAMN09039335
: Microbe sample from Metarhizobium album
Metadata retrieved
20 days ago
© 2022-2025 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN09039335
×
Metadata retrieved using the EBI API
BioSample Accession(s)
SAMN09039335, ERS18496814
strain
NS-104
identified by
Ping Hang
type material
type strain of Rhizobium album
NCBI submission package
Microbe.1.0
organism
Metarhizobium album
collection date
2017-10-30
isolation source
soil
collected by
Ping Hang
geo loc name
China
sample type
soil
BioSampleModel
Microbe, viral or environmental
ENA-FIRST-PUBLIC
2018-05-03
ENA-LAST-UPDATE
2024-03-15
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