JSON

Genome sc|0003529

Name

“Rhizobium oryzihabitans”

Database

NCBI Assembly

Accession

GCF_010669145.1

Genomics

Accession
NCBI Assembly:GCF_010669145.1
Cultures
Strain sc|0038893
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 1.9%
  • Quality: 89.6
Ribosomal and transfer RNA genes
  • 4 16S rRNAs (up to 100.0%)
  • 6 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
150.0 ×
Source
Other features
  • G+C Content: 59.3%
  • Coding Density: 87.21%
  • Codon Table: 11
  • N50: 3,195,345 bp
  • Contigs: 9
  • Largest Contig: 3,195,345 bp
  • Assembly Length: 5,858,741 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 14 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2017
Location
Not detected
Toponym
Geo Loc Name: China
Environment
Sample Type: cell
Isolation Source: the root of rice
Other
Temp: 30
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 14 days ago


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