Genome sc|0003534

Genomics

Accession

NCBI Assembly:JBGJJD000000000

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 94.06%
• Contamination: 0.96%
• Quality: 89.26

Sequencing depth

12.0 ×

Source

• SRA: SRR29223149

Other features

• G+C Content: 42.24%

Automated checks

Failed: Cannot find ncbi:assembly:JBGJJD000000000

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Last modified 9 days ago

Sample Metadata

BioSample entries

• BioSample: SRS21464567

Date

Collection Date: 2018-08

Location

Lat Lon: 59° 48′ 36″ N, 17° 39′ 36″ E

View sampling location map

Toponym

Geo Loc Name: Sweden:Uppsala

Environment

Env Broad Scale: biogas digester biome

Env Local Scale: thermophilic high ammonia biogas digester with foodwaste and household waste

Env Medium: digestate

Other

Not detected

Package

Ncbi Submission Package: MIMS.me.wastewater.6.0

Biosamplemodel: MIGS/MIMS/MIMARKS.wastewater

All retrieved samples

• SRS21464567: MIMS Environmental/Metagenome sample from biogas fermenter metagenome

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Metadata retrieved 9 days ago