Genome sc|0000415

Typification

Nomenclatural type of:

• Acherontichlamydia pituitae^Ts

Genomics

Accession

NCBI Assembly:GCA_019634675.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 96.96%
• Contamination: 0.68%
• Quality: 93.56

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 20 amino acids

Sequencing depth

20.0 ×

Source

• BioSample: SAMN19004950

Other features

• G+C Content: 46.5%
• Coding Density: 89.76%
• Codon Table: 11
• N50: 366,247 bp
• Contigs: 21
• Largest Contig: 1,079,985 bp
• Assembly Length: 2,665,416 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

CheckM was used to calculate completeness and contamination

Automated checks

Complete

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Last modified 27 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN19004950

Date

Collection Date: 2018-07-10

Location

Lat Lon: 23° 19′ 12″ N, 114° 10′ 12″ E

View map of sampling locations

Toponym

Geo Loc Name: Hong Kong

Environment

Isolation Source: ACE-degrading consortia seeded with activated sludge sampled from 6 local waste water treatment plants (WWTPs)

Other

Rel To Oxygen: aerobe

Package

Not detected

All retrieved samples

• SAMN19004950: Metagenome or environmental sample from activated sludge metagenome

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Metadata retrieved 27 days ago