JSON

Genome sc|0000417

Name

Promineifilum breveTs

Database

NCBI Assembly

Accession

GCA_900066015.1

Genomics

Accession
NCBI Assembly:GCA_900066015.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.64%
  • Contamination: 3.64%
  • Quality: 75.44
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
364.0 ×
Source
Other features
  • G+C Content: 64.0%
  • Coding Density: 89.88%
  • Codon Table: 11
  • N50: 3,989,163 bp
  • Contigs: 3
  • Largest Contig: 3,989,163 bp
  • Assembly Length: 5,033,966 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Collection Date: 2012-09-24
Location
Geographic Location Latitude: 45.6430
Geographic Location Longitude: 14.8594
Toponym
Geographic Location Country And Or Sea: Slovenia
Environment
Environment Biome: Wastewater
Environment Feature: WWTP
Other
Not detected
Package
Ena Checklist: ERC000023
All retrieved samples
Metadata retrieved about 1 month ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license