JSON

Genome sc|0000442

Name

Azobacteroides pseudotrichonymphaeTs

Database

NCBI Assembly

Accession

GCA_000010645.1

Genomics

Accession
NCBI Assembly:GCA_000010645.1
Type
Single-Cell Amplified Genome (SAG)
Estimated Quality Metrics
  • Completeness: 99.95%
  • Contamination: 0.0%
  • Quality: 99.95
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 32.95%
  • Coding Density: 74.51%
  • Codon Table: 11
  • N50: 1,114,206 bp
  • Contigs: 5
  • Largest Contig: 1,114,206 bp
  • Assembly Length: 1,224,919 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified 8 days ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Isolation Source: a single cell of termite (Coptotermes formosanus) gut protist
Other
Host: Pseudotrichonympha grassii (protist) in the gut of the termite Coptotermes formosanus
Package
Ncbi Submission Package: Generic.1.0
Biosamplemodel: Generic
All retrieved samples
Metadata retrieved 8 days ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license