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cognitis nomina
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Genomes
sc|0000449
JSON
Genome sc|0000449
Name
Magnetobacterium casense
Ts
Database
NCBI Assembly
Accession
GCA_000714715.1
Genomics
Accession
NCBI Assembly:
GCA_000714715.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
92.41%
Contamination:
0.91%
Quality:
87.86
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 19 amino acids
Sequencing depth
37.0 ×
Source
BioSample: SAMN02726339
Other features
G+C Content:
48.87%
Coding Density:
88.26%
Codon Table:
11
N50:
90,253 bp
Contigs:
70
Largest Contig:
252,526 bp
Assembly Length:
3,415,676 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Sample Metadata
Date
Collection Date:
2010-01
Location
Not detected
Toponym
Geo Loc Name:
China: Lake Miyun, Beijing
Environment
Isolation Source:
freshwater lake
Other
Not detected
Package
Ncbi Submission Package:
Microbe.1.0
Biosamplemodel:
Microbe, viral or environmental
All retrieved samples
SAMN02726339
: Microbe sample from Candidatus Magnetobacterium casensis
Metadata retrieved
9 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN02726339
×
strain
MYR-1
NCBI submission package
Microbe.1.0
organism
Candidatus Magnetobacterium casensis
collection date
2010-01
isolation source
freshwater lake
geo loc name
China: Lake Miyun, Beijing
BioSampleModel
Microbe, viral or environmental
ENA-FIRST-PUBLIC
2014-04-14
ENA-LAST-UPDATE
2021-02-28
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