Genome sc|0005391


Database

NCBI Assembly

Accession

GCA_008534395.1

Genomics

Accession
NCBI Assembly:GCA_008534395.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 0.9%
  • Quality: 94.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
2969.0 ×
Source
Other features
  • G+C Content: 35.52%
  • Coding Density: 89.4%
  • Codon Table: 11
  • N50: 67,823 bp
  • Contigs: 70
  • Largest Contig: 234,254 bp
  • Assembly Length: 2,093,156 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified about 1 month ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016-07/2017-08
Location
Lat Lon: 23° 3′ N, 113° 10′ 12″ E
View map of sampling locations
Toponym
Geo Loc Name: China:Sun Yat-sen University,Guangzhou
Environment
Sample Type: metagenomic assembly
Isolation Source: acid mine drainage
Other
Not detected
Package
Not detected
All retrieved samples

Metadata retrieved about 1 month ago


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