Genome sc|0005392

Name

Nitrosospongia ianthellae^Ts

Database

NCBI Assembly

Accession

GCA_900620265.3

Genomics

Accession

NCBI Assembly:GCA_900620265.3

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

Completeness: 99.03%
Contamination: 0.97%
Quality: 94.18

Ribosomal and transfer RNA genes

1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids

Sequencing depth

33.0 ×

Source

BioSample: SAMEA5126984

Other features

G+C Content: 65.0%
Coding Density: 89.13%
Codon Table: 11
N50: 35,099 bp
Contigs: 113
Largest Contig: 135,585 bp
Assembly Length: 1,996,680 bp
Ambiguous Assembly Fraction: 0.0084%

Automated checks

Complete

Last modified 4 months ago

Sample Metadata

BioSample entries

BioSample: SAMEA5126984

Date

Collection Date: 2011-10-08

Location

Lat Lon: 18° 36′ S, 146° 28′ 60″ E

View map of sampling locations

Toponym

Geographic Location Country And Or Sea: Australia

Environment

Isolation Source: marine coral reef biome

Other

Not detected

Package

Ena Checklist: ERC000011

All retrieved samples

SAMEA5126984: Metagenome bin of a thaumarchaeal symbiont from the marine sponge Ianthella basta - orange DNA extraction.

Metadata retrieved 4 months ago

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