Genome sc|0000054


Database

NCBI Assembly

Accession

GCA_016860565.1

Genomics

Accession
NCBI Assembly:GCA_016860565.1
Estimated Quality Metrics
  • Completeness: 93.4%
  • Contamination: 1.9%
  • Quality: 83.9
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 32.09%
  • Coding Density: 85.5%
  • Codon Table: 11
  • N50: 23,999 bp
  • Contigs: 82
  • Largest Contig: 52,211 bp
  • Assembly Length: 1,309,651 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 21 days ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Geo Loc Name: Japan
Environment
Sample Type: metagenomic assembly
Isolation Source: ovaries of Brontispa longissima
Other
Host: Brontispa longissima
Package
Ncbi Submission Package: Generic.1.0 • MIMS.me.host-associated.6.0
Biosamplemodel: Generic • MIMS.me.host-associated
All retrieved samples

Metadata retrieved 21 days ago

Sequencing Experiments

Illumina MiSeq paired end sequencing of SAMD00222945


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