Genome sc|0005557

Name

Calditenuis ramacidaminiphagus

Database

NCBI Assembly

Accession

GCA_050589285.1

Genomics

Accession

NCBI Assembly:GCA_050589285.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

Completeness: 98.06%
Contamination: 0.0%
Quality: 98.06

Ribosomal and transfer RNA genes

1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids

Source

Other features

G+C Content: 62.0%
Coding Density: 91.24%
Codon Table: 11
N50: 102,387 bp
Contigs: 19
Largest Contig: 200,429 bp
Assembly Length: 1,504,789 bp
Ambiguous Assembly Fraction: 0.0%

Submitter comments

Genome quality was assessed using CheckM v1.0.12. Transfer RNA genes were predicted with tRNAscan-SE v2.0.5, and ribosomal RNA genes were identified using barrnap v0.9.

Automated checks

Complete

Last modified 18 days ago

Sample Metadata

BioSample entries

Date

Collection Date: 2021 • 2020

Location

Not detected

Toponym

Geo Loc Name: USA: Great Boiling Spring, Gerlach, NV

Environment

Isolation Source: lab enrichment from Great Boiling Spring Sediment

Other

Not detected

Package

Biosamplemodel: MIMS.me; MIGS/MIMS/MIMARKS.sediment

All retrieved samples

Metadata retrieved 18 days ago

© 2022-2026 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license