Genome sc|0005563

Genomics

Accession

NCBI Assembly:GCA_049570475.1

Type

Enrichment Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 0.0%
• Quality: 100.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

14.0 ×

Source

• SRA: SRR23064070
• SRA: SRR23044201

Other features

• G+C Content: 54.6%
• Coding Density: 90.27%
• Codon Table: 11
• N50: 1,521,743 bp
• Contigs: 1
• Largest Contig: 1,521,743 bp
• Assembly Length: 1,521,743 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

This a complete, closed genome

Automated checks

Complete

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Last modified 3 months ago

Sample Metadata

BioSample entries

• BioSample: SRS16436611
• BioSample: SRS16418083

Date

Collection Date: 2021-07-20

Location

Lat Lon: 44° 34′ 1.7″ N, 110° 48′ 20″ W

View map of sampling locations

Toponym

Geo Loc Name: USA: Yellowstone National Park, WY

Environment

Isolation Source: hot spring

Env Broad Scale: hot spring

Env Local Scale: geothermal heated sediment

Env Medium: hot spring sediment

Other

Not detected

Package

Not detected

All retrieved samples

• SRS16436611: Metagenome or environmental sample from mixed culture metagenome
• SRS16418083: Metagenome or environmental sample from mixed culture metagenome

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Metadata retrieved 3 months ago