Genome sc|0005575 Ts


Database

NCBI Assembly

Accession

GCA_032906765.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly: GCA_032906765.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 97.53%
  • Contamination: 2.8%
  • Quality: 83.53
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 76.0%)
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Sequencing depth
506.0 ×
Source
Other features
  • G+C Content: 58.0%
  • Coding Density: 89.24%
  • Codon Table: 11
  • N50: 224,125 bp
  • Contigs: 13
  • Largest Contig: 423,742 bp
  • Assembly Length: 1,774,357 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
The genomic quality was estimated by CheckM2.
Automated checks
Complete

Last modified 8 months ago

Sample Metadata

BioSample entries
Date
Collection Date: 2019-01-30
Location
Lat Lon: 36° 17′ 24″ N, 127° 12′ E
View map of sampling locations
Toponym
Geo Loc Name: South Korea
Environment
Isolation Source: groundwater
Other
Not detected
Package
Not detected
All retrieved samples

Metadata retrieved 8 months ago

Sequencing Experiments

Meta shotgun sequencing of CO2-rich groundwater


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